CDS

Accession Number TCMCG002C10403
gbkey CDS
Protein Id XP_020089832.1
Location complement(join(10090636..10090710,10090855..10090955,10091128..10091271,10091377..10091488,10091674..10091728,10103248..10103317,10103614..10103705,10103783..10103831,10103903..10104076,10104231..10104330,10104442..10104585,10104700..10104852,10104934..10104982,10105075..10105172,10105251..10105406,10105499..10105856,10105959..10106029,10106448..10106531,10106612..10106773,10106865..10107008,10107425..10107660,10108587..10108920))
Gene LOC109711284
GeneID 109711284
Organism Ananas comosus

Protein

Length 986aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020234243.1
Definition putative transcription elongation factor SPT5 homolog 1 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription elongation factor SPT5
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15172        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006354        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006368        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032044        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCGGAACCGACGCCACGACGACGACGACGACGAGGAGTACGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGAGGAGGGGGAAGGGCGCCGGAGGGCGGAAGCGGGGGCGATCCGATTTTATTGATGATACTGCGTTGGAGGACGATGAGGACGAGGAGGACGAGGAGGACGACGACGATGAGGATTTTGGCCGCGGCGGCGGCGGCGGCGGCGGCGGCCGCGGGAAGAAGCGGCGGTCGGGGTCGGAGTTCTTCGAGCTCGAAGCGGCCGTCGACAGCGACGAAGGGGAGGAGGATGATGAAGAGGGGGAGGATGATTTCATCAATGATGCCGGAGCTGATCTACCTGATGAGGAGGAGGGTAGACGGTTACATCGTCCGTCCATCCTTATGGGTGAGGATCAGGAAGATGTCGATGAGATAGAGAGACAAGTATATGAAAGATATGCAAAGTCAAGCCATGTGGAATATGGCGATGACGCGACAGAAGTCGAACAACAAGCTTTATTGCCATCTGTGAAGGATCCAAAGTTGTGGATGGTGAAATGTGCGATTGGTCATGAGCGCGAGACAGCTATATGTCTCATGCAAAAGTTCATAGATAGGGCAGATCTCCAGATAAAGTCAGCTATCGCGTTGGACCATCTAAAAAACTACATTTATGTTGAAGCTGAAAAGGAAGCTCATGTTAAAGAGGCTTGCAAAGGTCTAAGAAATATATATTCTTCAGCAAAAATTATGCTCGTGCCTATAAAGGAGATGACTGATGTTCTGTCAGTTGAAAGCAAATCTGTTGATCTTGCTAGGGATACGTGGGTTAGAATGAAGATAGGCATATATAAAGGAGATCTTGCTAAAGTTGTTGATGTTGACAATGTGCGCCAGAGAGTAACTGTTAAGCTAATTCCAAGAGTTGATTTACAAACTCTTGCCAATAAACTGGAAGGTAGGGATATTGGAAAGAAGAAGACATTTGTACCTCCACCAAGGTTTTTTAACATTGATGAAGCAAGGGAGATGCGTATCCGTGTGGAGAGGAGGAGGGACAGAGATTCAGGGGAGTATTTCGAGATGGTTGATGGTTTAATGTTCAAAGATGGATTCCTTTACAAAACAGTATCATTTAAGTCAATCAGCTCACAAAATATTCAGCCAACCTTTGATGAGCTTGAGAAATTTCGGAAACCTGGTGATGATGTTAATGGAGACGTGGCTAGCTTGTCCACTTTGTTTGCAAACAGGAAGAAAGGCCATTTCATGAAAGGTGATGCTGTCATTGTTGTTCGAGGAGATCTCAAGAATCTGGAAGGCTGGGTTGAGAAAGTAGAGGAGGACACTGTCCATATCAGACCGAAAATGCCGGACCTTCCTAAAACATTGGCTTTCAATGAGAAGGAGCTGTGCAAATACTTTAAACCTGGAGACCATGTAAAAGTAGTTTCTGGTGTTCAAGAAGGTGCAACTGGTATGGTTGTAAAAGTTGAGGGGCATGTTTTGATTATCTTATCAGACACTACAAAAGAGCATATCCGTGTATTTGCGGACCATGTAGTCGAAAGTTCTGAAATTACTACTGGGGTTACACGAATTGGGGATTACGAGTTGCATGATCTTGTGATGCTAGACAACATGTCATTTGGTGTAATTATACGTGTGGAAAGTGAAGCATTTCAGGTTCTCAAAGGTGTACCTGATAGACCTGAGGTCGTGCTTATTAAACTGAGGGAAATAAAGAGCAAGATTGACAGACGAACCAATGCCAAAGATCGATCGAATAATATTGTGTCAGTTAAGGATGTTGTGAGGGTAATTGAAGGACCATGTAAGGGGAAGCAAGGGCCTGTTGAGCACATACATAAAGGGATCTTGTTCATCTATGATCGACACCACCTGGAGCATGCTGGTTTTATATGTGCTAAAGCACAGTCTTGTGTAGTTGTTGGTGGATCAAATAGGGGTCACGGCATGAATGGTGTAGATGCATTAGATTCTCGATTTGGTGGTTTGAGATCTTCATCGAATGTTTTGCAGTCCCCAAGAAGGCTTCCTCCAAGAGGACCTCCTACAAATTTTGGTGGAAGGTTCGGAGGTGGAAGGTTCGGAGGTGGAAGAGGGCATGATTCTTTGGTAGGTAGATGCATTAAAATTAAATCTGGTCCCTTTAAGGGGTATCGCGGCCGTGTTAAGGAGATCACCAGTGGATTTGTGCGCGTAGAGCTGGATTCACAGATGAAGATTGTCACAGTTAAAAGAGACGAGATTTCTGATACTCCTGGTGCTGCAACACCATTCCGTGAATCAAGATTTGCTTCGGGTAGTGAAACTCCAATGCATCCATCCCGGACGCCACTTCATCCAATTCAGACGCCAATGAGAGATCCTTCAGCAACTCCCATACATGATGGTATGAGAACACCATTGCGCAACCGAGCATGGGCGCCGATGAGTCCTCCAAGGGATAGCTGGGAAGACGGAAATCCTGCCACTTGGGGAAGCAGTCCGCCTTATCAGCCAGGAACACCTCCGGCCCGGCCATATGAAGCACCTACTCCTGGTTCAGGTTGGGCTAACACTCCAGGTGGCAATTATAATGACTCTCCAACTCCCAGGGATAACAGCTATGGAAATGCTCCAAGCCCTTACTTGCCATCAACACCTGTTGGACAACCGATGACCCCTACTTCTGCATCTTATCTCCCTGGAACTCCTGGCGGACAGCCGATGACACCTGGGAATGTTGGAATGGATATGATGTCTCCTTTAATAGGTGGCGAAGGTGATGGCATATGGTACATGCCCGACATTTTGGTGAATACTGTTAGGCCTGGAGAGGATCCTCATATTGGAGTAGTTAGAGAAGTGCTGACGAAGCAGAAGTTTCAAATTCGAGATTCTGCTTTTATGGCTAAGAAGCTCATTTCGATACCCGACACTTCTTGGTAG
Protein:  
MARNRRHDDDDDEEYEEEEEEEEEEEEEVVRRGKGAGGRKRGRSDFIDDTALEDDEDEEDEEDDDDEDFGRGGGGGGGGRGKKRRSGSEFFELEAAVDSDEGEEDDEEGEDDFINDAGADLPDEEEGRRLHRPSILMGEDQEDVDEIERQVYERYAKSSHVEYGDDATEVEQQALLPSVKDPKLWMVKCAIGHERETAICLMQKFIDRADLQIKSAIALDHLKNYIYVEAEKEAHVKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKVVDVDNVRQRVTVKLIPRVDLQTLANKLEGRDIGKKKTFVPPPRFFNIDEAREMRIRVERRRDRDSGEYFEMVDGLMFKDGFLYKTVSFKSISSQNIQPTFDELEKFRKPGDDVNGDVASLSTLFANRKKGHFMKGDAVIVVRGDLKNLEGWVEKVEEDTVHIRPKMPDLPKTLAFNEKELCKYFKPGDHVKVVSGVQEGATGMVVKVEGHVLIILSDTTKEHIRVFADHVVESSEITTGVTRIGDYELHDLVMLDNMSFGVIIRVESEAFQVLKGVPDRPEVVLIKLREIKSKIDRRTNAKDRSNNIVSVKDVVRVIEGPCKGKQGPVEHIHKGILFIYDRHHLEHAGFICAKAQSCVVVGGSNRGHGMNGVDALDSRFGGLRSSSNVLQSPRRLPPRGPPTNFGGRFGGGRFGGGRGHDSLVGRCIKIKSGPFKGYRGRVKEITSGFVRVELDSQMKIVTVKRDEISDTPGAATPFRESRFASGSETPMHPSRTPLHPIQTPMRDPSATPIHDGMRTPLRNRAWAPMSPPRDSWEDGNPATWGSSPPYQPGTPPARPYEAPTPGSGWANTPGGNYNDSPTPRDNSYGNAPSPYLPSTPVGQPMTPTSASYLPGTPGGQPMTPGNVGMDMMSPLIGGEGDGIWYMPDILVNTVRPGEDPHIGVVREVLTKQKFQIRDSAFMAKKLISIPDTSW